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#actin

22 public questions tagged with this topic.

Which protein links intermediate filaments to actin filaments and microtubules?

Plectin is a giant cytolinker of the plakin family that simultaneously recognizes actin, microtubules and intermediate filaments, integrating cytoskeletal networks into a cohesive mechanical continuum. Its structure includes an N-terminal actin-binding domain composed of two calponin-homology motifs, a central 200-nm coiled-coil rod dimerization domain, and a C-terminal repeat domain that binds vimentin, keratin, desmin and glial fibrillary acidic protein with distinct isoform specificity. Alternative splicing of first exons targets isoforms to hemidesmosomes via integrin beta4, to focal adhesions, desmosomes, mitochondria and nuclear envelope. At these sites plectin recruits microtubule-associated proteins and directly contacts tubulin, coordinating plus-end dynamics with intermediate filament anchorage. Deletion produces skin blistering with muscular dystrophy due to failure of stress transfer. In contrast spectrin forms tetramers capping actin at membranes, fimbrin bundles actin in microvilli, filamin crosslinks actin orthogonally, none containing high-affinity intermediate filament repeats. Thus plectin alone provides universal bridging activity essential for epithelial and muscle integrity.

Ref: Alberts Ch 16; Fuchs & Cleveland, Science 1998 plakin plectin crosslinks IF, actin, microtubules.

Myosin II is involved in:

Myosin II is the principal motor generating contractile force for cell division in animal cells. It assembles into bipolar thick filaments through coiled coil tail dimerization, each filament containing about 30 dimers with heads oriented opposite at ends. In anaphase, equatorial cortex enriched in active RhoA GTP recruits anillin, septins and centralspindlin, concentrating myosin II and actin into contractile ring. Phosphorylation of regulatory light chain by ROCK and citron kinase activates myosin II ATPase increasing ten fold, driving filament sliding that constricts ring from 30 micrometers to midbody during cytokinesis. Ring contraction coupled with plasma membrane insertion via recycling endosomes and ESCRT III mediated abscission completes separation. Myosin II does not transport organelles which requires myosin V, does not assemble microtubules nor segregate chromosomes which depend on microtubule kinesin dynein. Genetic depletion or blebbistatin inhibition blocking myosin II ATPase causes multinucleation confirming cytokinesis role. This contractile mechanism ensures equal partition of cytoplasm and maintenance of genomic stability across daughter cells during mitotic exit.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 17: Cytokinesis and Contractile Ring Myosin II.

Which troponin subunit is responsible for calcium binding?

Troponin heterotrimer every 38 nanometer along thin filament alongside tropomyosin provides calcium dependent switch. Subunits: TnT 30 to 35 kilodalton tropomyosin binding anchoring complex, TnI 21 to 24 kilodalton inhibitory binding actin blocking myosin in diastole, TnC 18 kilodalton calcium binding sensor homologous to calmodulin containing four EF hand helix loop helix motifs. N terminal low affinity regulatory sites I II bind calcium transiently during systole with Kd 5 micromolar triggering activation, affinity modulated by magnesium competition, C terminal high affinity structural sites III IV bind calcium magnesium constitutively with Kd nanomolar stabilizing complex. Calcium binding to N lobe induces opening exposing hydrophobic patch that binds switch peptide residues 148 to 158 of TnI removing C terminal inhibitory mobile domain from actin. This releases tropomyosin steric block exposing myosin binding sites permitting cross bridge cycling. Mutation TnC G159D reduces calcium affinity blunting contractility, TN-M nonexistent. Thus TnC uniquely senses calcium transient translating electrical signal into mechanical contraction and force generation.

Ref: Lodish et al., Molecular Cell Biology, 9th ed., Chapter 18: Troponin C as Calcium-Binding Subunit.

Which protein is responsible for anchoring actin filaments to the Z-disc in muscle cells?

Organization of sarcomere depends on anchoring thin filaments at Z disc providing mechanical integrity during repetitive contraction. Z disc 100 nanometer thick electron dense structure contains alpha actinin antiparallel dimer crosslinking antiparallel barbed ends from adjacent sarcomeres into orthogonal lattice spaced 20 nanometer, plus titin Z repeats, telethonin, myotilin, FATZ. Nebulin huge filamentous protein 600 to 900 kilodalton with 185 repeats of 35 residue nebulin motif SDXXYK each binding one actin monomer, plus N terminus interacting with tropomodulin capping pointed end and C terminal SH3 domain binding myopalladin CapZ inside Z disc embedding. By acting as molecular ruler nebulin dictates thin filament length and stabilizes filament against cofilin severing and depolymerization, loss causing nemaline myopathy with shorter thin filaments. Spectrin provides membrane skeleton in erythrocytes, dystrophin links actin via cysteine rich domain to dystroglycan complex at costameres for lateral force transmission, not Z disc anchoring. Titin provides elasticity and scaffold but nebulin specialized for actin Z disc anchorage and length specification.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 17: Nebulin Anchoring Actin at Z-Disc.

Which of the following determines the speed of myosin movement along actin filaments?

Mechanistic model of myosin step size explains velocity differences among isoforms. Lever arm hypothesis states small conformational change of converter domain upon phosphate release rotation about 10 degrees amplified by rigid lever arm helical neck decorated with IQ motifs bound to light chains acting as fulcrum. Step size roughly equals lever length times angular change, so each IQ motif about 5 to 6 nanometer contributes. Constructing chimeras fusing artificial alpha actinin repeats or duplicating IQ motifs increased sliding speed linearly in motility assays without altering ATPase kcat, confirming length determines speed. Myosin V with six IQ motifs long lever moves 36 nanometer step fast cargo transport, myosin II with two IQ short lever 5 to 10 nanometer slower but ensemble force generation. Regulatory light chain phosphorylation changes recruitment and duty ratio in smooth muscle, actin length affects number of interacting heads not intrinsic speed, ATP concentration alters velocity only below Km about 50 micromolar. Therefore intrinsic determinant of maximal speed at saturating ATP is length of lever arm translating small catalytic domain rotation into amplified translation and faster sliding.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 16: Lever Arm Length and Myosin Speed.

The power stroke in the actin-myosin cycle occurs due to:

Cross bridge cycle parsed by transient kinetics reveals distinct substeps responsible for detachment priming and force generation. Myosin rigor complex actin myosin no nucleotide strongly bound. ATP binding rate 1 to 3 per micromolar per second causes rapid dissociation 500 to 1000 per second. Detached myosin hydrolyzes ATP to ADP plus inorganic phosphate rate about 50 per second inducing recovery stroke moving lever arm into pre power stroke high energy conformation approximately 90 degree rotation storing strain. Myosin ADP Pi weakly binds actin via electrostatic contacts. Isomerization into strongly bound state triggers phosphate release from active site, observed as burst of Pi, accompanied by closure of actin binding cleft and 60 degree rotation of converter domain generating power stroke dragging actin 5 to 10 nanometer generating 2 to 6 piconewton force. ADP remains bound temporarily then released rate limiting step about 20 per second returning to rigor. Thus power stroke specifically driven by phosphate release, not ATP binding which detaches, nor ADP binding which slows, nor actin monomer exchange unrelated to motor mechanism.

Ref: Lodish et al., Molecular Cell Biology, 9th ed., Chapter 18: Power Stroke and Phosphate Release Mechanism.

Which myosin type is responsible for intracellular cargo transport?

Intracellular cargo trafficking covers both microtubule and actin routes. Long range 10 to 100 micron interphase transport uses kinesin dynein on microtubules, while short range local transport within cortical actin rich zones 1 to 10 micron uses myosin. Processive myosin capable of multiple steps without dissociation required for efficient transport. Myosin V class features high duty ratio spending about 70 percent cycle strongly attached, dimeric coiled coil tail, six IQ motifs with calmodulin light chains per head forming long 24 nanometer lever arm achieving 36 nanometer step matching helical repeat of actin, hand over hand walking mechanism with gating coordinated by intramolecular strain. Transport cargos include melanosomes via interaction with melanophilin Rab27a in melanocytes, synaptic vesicles, endoplasmic reticulum and mRNA in budding yeast via Myo2 Myo4. Myosin I monomeric membrane tether, myosin II bipolar contractile filaments for cytokinesis low duty ratio non processive, myosin VI minus end directed for endocytosis. Therefore myosin V primary dedicated motor for processive intracellular cargo transport along actin cables and cortical networks.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 17: Myosin V and Cargo Transport.

The rapid turnover of actin filaments in vivo compared to in vitro is primarily due to:

Pure actin solution polymerized exhibits slow turnover due to low off rates 0.2 to 1 per second and minimal nucleation. In living cell turnover accelerated 50 to 100 fold evidenced by FRAP recovery half time 10 to 30 seconds for cortical actin. Acceleration attributed to collaborative action of cofilin and profilin. Cofilin severs ADP actin filaments increasing number of pointed ends depolymerizing at 10 per second vs 0.8 spontaneous and also increases off rate at pointed ends. Profilin ADP G actin complex undergoes rapid nucleotide exchange rate constant increase 1000 fold from 0.02 to 20 per second due to opening actin nucleotide cleft, forming profilin ATP actin that adds exclusively to barbed ends at diffusion limited rate. Delivery to FH1 domains of formins and Ena VASP concentrates monomers locally. Additional proteins such as CapZ, twinfilin and Srv2 CAP synergize. Elevated monomer alone would shift equilibrium but not accelerate dynamics, excess ATP hydrolysis uncoupled wasteful, low ionic strength inhibits polymerization by reducing charge shielding. Hence presence of cofilin profilin system explains rapid in vivo turnover essential for migration.

Ref: Pollard and Earnshaw, Cell Biology, Chapter 12: Rapid Actin Turnover by Cofilin Profilin In Vivo.

Which of the following proteins is required for the formation of lamellipodia?

Lamellipodium broad veil like extension 1 to 5 micron wide 0.1 to 0.2 micron thick driving mesenchymal migration requires continuous branched actin assembly at leading edge. Key organizer is Rac1 GTP small GTPase activating pentameric WAVE regulatory complex comprising WAVE, Abi, Nap1, Sra1 and HSPC300. Upon activation Rac1 binding to Sra1 releases VCA domain of WAVE which binds G actin and Arp2/3 complex at membrane, inducing nucleation of daughter filaments at 70 degree angle. Iterative branching creates dense network with barbed ends abutting membrane, polymerizing and generating pushing force essential for protrusion. Imaging with photoactivatable actin shows retrograde flow balancing polymerization. Pharmacological inhibition CK666 blocking Arp2/3 activation site abrogates lamellipodia formation, cells instead form filopodia via formins, confirming Arp2/3 indispensability for lamellipodia. Myosin II provides retraction at rear, dynein microtubule motor for centrosome positioning, spectrin supporting membrane cortex, while Arp2/3 specifically drives lamellipodia protrusive network and motility. Continuous turnover of branched meshwork allows rapid adaptation to chemotactic cues and directional persistence during migration.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 16: Lamellipodia Formation and Arp2/3 Requirement.

What is the function of CapZ in actin regulation?

Barbed end availability determines where new polymerization occurs in lamellipodia and filopodia. CapZ heterodimer alpha beta forms cap with extremely low dissociation rate half life 30 minutes in vitro. Binding interface extensive, burying 2000 square angstroms, alpha C terminal tentacle interacting with hydrophobic cleft between actin subdomains 1 and 3 of ultimate subunit, beta tentacle contacting penultimate subunit groove, physically blocking monomer docking. Quantitative fluorescence speckle microscopy shows most barbed ends in resting cells are capped, only about 5 percent free, but seconds after stimulation by EGF uncapping factors CARMIL complex containing CPI motif binds CapZ weakening affinity 100 fold and PIP2 binding further destabilizes, freeing ends for Arp2/3 mediated branching and rapid protrusion. CapZ does not nucleate new filaments which requires Arp2/3 activation or formin dimer, does not sever filament, function distinct from cofilin gelsolin, and does not hydrolyze ATP, acting purely as high affinity terminator preventing polymerization at plus end important for remodeling.

Ref: Lodish et al., Molecular Cell Biology, 9th ed., Chapter 18: CapZ Barbed End Capping Function.

Which of the following proteins is a major crosslinker of actin filaments in the cytoskeleton?

Actin filaments crosslinked into distinct architectures produce diverse mechanical properties. Short crosslinkers like fimbrin fascin 8 to 12 nanometer spacing generate tight parallel bundles in microvilli and filopodia for protrusion, long crosslinkers alpha actinin filamin 30 to 40 nanometer create loose networks and antiparallel bundles allowing myosin II insertion for contraction. Alpha actinin antiparallel homodimer 35 nanometer rod contains N terminal actin binding domain with paired calponin homology CH1 CH2, four spectrin repeats dimerization core and C terminal calmodulin like EF hands regulated by PIP2 calcium. Each dimer binds two filaments at distance matching spectrin repeat length. In Z disc alpha actinin crosslinks antiparallel thin filaments, in stress fibers alternating polarity bundles, in focal adhesions interacts with vinculin zyxin linking to integrins. Mechanical unfolding of spectrin repeats under tension provides elasticity. Tropomyosin binds along groove not crosslinking, profilin monomer regulation, Rho GTP upstream signal not structural. Hence alpha actinin recognized as major physiological crosslinker establishing both meshworks and contractile bundles essential for force transmission.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 16: Alpha-Actinin Crosslinking Actin Filaments.

Which of the following proteins stabilizes actin filaments by binding along their length?

Skeletal muscle thin filaments extend from Z disc to near M line, length precisely regulated 1.0 micrometer in cardiac, 1.1 to 1.3 in skeletal for optimal overlap with thick filaments for force generation. Nebulin, 600 to 900 kilodalton protein encoded by NEB gene, composed of 185 tandem nebulin repeats of 35 amino acids each predicted to contact single actin monomer plus C terminal SH3 domain anchoring at Z disc via interactions with CapZ, titin Z repeats and desmin intermediate filaments. By spanning entire thin filament, nebulin acts as molecular ruler templating polymerization length during myofibrillogenesis and stabilizing filament against lateral sliding and cofilin mediated severing. Structural studies show repeats align along actin helical groove stabilizing interaction with tropomyosin troponin. Human null mutations cause nemaline myopathy with variable thin filament length and weakness. CapZ caps barbed plus end, tropomodulin caps pointed minus end, gelsolin severs, but lateral stabilization along whole shaft best described by nebulin ruler function important for muscle structure.

Ref: Alberts et al., Molecular Biology of the Cell, 7th ed., Chapter 16: Nebulin and Thin Filament Stabilization.