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#intron

2 public questions tagged with this topic.

Group II intron splicing forms

Group II introns share mechanistic ancestry with spliceosomes, forming lariat structure rather than linear product. First step uses internal bulged adenosine within intron domain VI as nucleophile; its 2' OH attacks 5' splice site, generating branched intermediate where intron 5' end linked via 2'-5' phosphodiester to branch point, forming loop. Second step, 5' exon attacks 3' splice site, ligating exons and releasing lariat intron. This lariat pathway underpins evolution of spliceosomal snRNA-mediated splicing in eukaryotic nuclei. This refined regulation supports accurate ribosomal assembly, quality control and translational fidelity under diverse physiological conditions and growth states.

Ref: Lodish et al., Molecular Cell Biology, 9th ed., Chapter 8, Group II intron lariat formation via branch-point adenosine

Group I intron splicing requires

Group I introns are self-splicing ribozymes catalyzing their own excision via two transesterification steps that require external guanosine cofactor. Free guanosine or GMP, GDP, GTP binds specific G-binding pocket in P7 paired region of intron tertiary structure. Its 3' hydroxyl serves as nucleophile attacking 5' splice site, becoming covalently attached to intron 5' end, freeing upstream exon. Second attack by upstream exon 3' OH on 3' splice site ligates exons. No ATP hydrolyzed, reversible, aided in vivo by maturases. This refined regulation supports accurate ribosomal assembly, quality control and translational fidelity under diverse physiological conditions and growth states.

Ref: Watson Molecular Biology of the Gene, 7th ed., Chapter 15, Group I intron self-splicing requiring external guanosine