Ribosomal DNA is organized as tandem repeats containing 18S, 5.8S, and 28S coding regions separated by internal transcribed spacers and external spacers. A probe specific to 18S sequence, under stringent hybridization conditions, anneals by complementary base pairing only to regions containing 18S coding DNA or its mature RNA transcript, not to 28S or intronic regions. This specificity allows detection of small subunit rRNA on northern blots, assessment of RNA integrity, quantification of expression, or localization of rDNA loci on Southern blots, supporting studies of phylogeny and ribosome b
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NCERT Biology Class XII Principles on Klenow fill-in labeling, Lehninger Chapter 9 DNA cloning techniques, and Molecular Cloning by Sambrook Chapter 10 documenting end-labeling of cohesive termini.