Skip to content

#bacterial growth phases

3 public questions tagged with this topic.

In a batch culture, which phase has zero net growth?

In batch culture population dynamics defined by net rate birth minus death. Lag phase net near zero during adaptation, log phase net strongly positive with mu dominant, stationary net zero because division still occurs using scavenged nutrients from lysed cells cryptic growth at rate equal to death rate from oxidative damage, acid stress, toxin accumulation. Viable counts plateau because new cells forming balance those losing colony forming ability. Microscopically heterogeneity high some cells dividing, some filamentous, some entering persistence via toxin antitoxin HipA. Optical density may continue slight rise due to cell size and storage inclusions but CFU flat. Death phase follows when death exceeds birth yielding negative net. Recognizing stationary zero net growth not absence activity crucial for understanding antibiotic tolerance persister cells that survive bactericidal drugs without resistance by dormancy, for interpreting growth curves where plate counts misleading if aggregated, and for designing fed batch strategies where preventing zero net extends productive exponential phase improving biomass yield and recombinant protein expression.

Ref: Brock Biology of Microorganisms, 16th ed., Chapter 6: Batch culture - Zero net growth in stationary.

The primary role of the stationary phase in bacterial growth is:

Upon entry into stationary phase nutrient exhaustion does not equate to dormancy but triggers extensive differentiation for long term survival. Genome wide expression reprogrammed by ppGpp alarmone binding RNA polymerase, sigma factor switch from RpoD to RpoS general stress sigma encoded by rpoS. RpoS regulon includes oxidative protection catalase HPII, exonuclease, DNA protection Dps compacting chromosome sequestering iron preventing Fenton chemistry, acid resistance Gad system glutamate decarboxylase, trehalose synthesis. Secondary metabolism activated nonribosomal peptide synthetases, polyketide synthases producing antibiotics bacitracin, streptomycin, prodigiosin to suppress competitors scavenging remaining nutrients. For sporeformers Spo0A phosphorelay initiates sporulation cascade costing ATP but ensuring durable spore with cortex dipicolinic acid calcium dehydrating core, SASPs protection. Biofilm formation curli fimbriae, cellulose, Pel polysaccharides. Energy production via maintenance metabolism using endogenous polyhydroxybutyrate, glycogen. Rapid fission not feature. This productive stationary physiology explains why antibiotic yields peak post exponentially and why industrial fermentations harvest secondary metabolites at stationary, also importance for persistence in natural environments where starvation predominates and competition fierce.

Ref: Prescott's Microbiology, 11th ed., Chapter 7: Stationary phase role - Sporulation and secondary metabolites.

Which phase of bacterial growth follows nutrient depletion and accumulation of toxic waste?

Batch culture progression from exponential to stationary triggered primarily by depletion of limiting substrates and buildup of inhibitory waste. During log phase glucose, ammonium, phosphate abundant, oxygen well dissolved, growth maximal. Cells actively metabolize producing organic acids acetate via overflow metabolism, carbon dioxide, secondary metabolites that acidify medium, increase osmolarity, reduce water activity. Oxygen consumption outpaces transfer creating microaerophilic conditions, electron transport slows, proton motive force drops. Sensors RelA synthesizes ppGpp upon uncharged tRNA, SpoT monitors fatty acid starvation, activating stringent response redirecting transcription from rRNA to stress genes governed by RpoS sigma. Consequently division rate declines, cell size reduces, storage compounds polyphosphate, glycogen accumulate, ppGpp inhibits initiation. When growth limiting threshold reached, culture enters stationary where cryptic growth recycles lysed cells. This nutrient and waste governed transition explains classic growth curve shape observed in closed system without replenishment, distinguishing batch from continuous chemostat where fresh medium maintains log phase indefinitely for industrial production.

Ref: Madigan et al., Brock Biology of Microorganisms, Chapter 6: Stationary phase triggers - Nutrient depletion.