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Dictyostelium

Practice questions covering Dictyostelium biology, including its life cycle, cellular processes, and key characteristics. Designed for students studying microbiology or related subjects.

30 questions

Multiple stalk formation from mutation in:

Aardvark locus encodes beta-catenin homologue interacting with alpha-catenin to link cadherin-like adhesion protein DdCAD-1 to actin cytoskeleton. During culmination, coordination of prestalk cell movement down stalk requires intact adherens junctions and single organizer tip. Aar null mutants fail to maintain tip integrity; tip fragments generating multiple ectopic stalk tubes rising from basal mass, phenotype termed multiple tipped mounds or multiple stalk formation. SmlA controls aggregate size, aca controls early aggregation, ACG controls germination, therefore none produce multiple stalks. Aar function illustrates conservation of beta-catenin role in maintaining organizing centers and suppressing secondary axis formation parallels vertebrate embryo development.

Ref: Nature Genetics, Aardvark beta-catenin homologue - multiple tip and stalk formation in Aar mutants.

High extracellular cAMP induces:

High ambient extracellular cAMP acts as positional cue favoring prespore differentiation through sustained protein kinase A activation. At millimolar levels, cAMP saturates desensitization mechanisms, maintaining intracellular messenger elevated, inducing transcription of prespore-specific genes encoding spore coat proteins while repressing prestalk markers. Low-density monolayer experiments show cAMP plus conditioned medium induces prespore markers, whereas DIF-1 alone induces prestalk. High cAMP therefore mirrors posterior slug environment where prespore cells reside. Prestalk formation prefers low cAMP together with DIF-1, vegetative growth requires folate, slug dispersal demands low cAMP oscillations, highlighting dosage-dependent fate specification mechanism.

Ref: Methods in Molecular Biology, Prespore induction by high cAMP - SP70 expression and PKA signaling mechanism.

Transition unicellular-multicellular regulated by:

Unicellular to multicellular transition is triggered by nutritional status rather than oxygen, pH, or temperature cues dominant in soil microenvironment. Decline in bacterial prey reduces intracellular amino acids and folate, decreasing TORC1 activity, activating YakA protein kinase, and permitting expression of early developmental proteins. Folate receptor downregulation and cAR1 upregulation switch chemotaxis preference from bacteria to cAMP. Nutrient depletion also induces autophagy providing metabolites for development without external food. Oxygen depletion would affect aeration but not initiate aggregation, pH increase and temperature drop are unreliable signals, making nutrient limitation authentic ecological trigger inducing survival morphogenesis and fruiting.

Ref: Nature, Dictyostelium starvation response - TOR downregulation and YakA activation triggering multicellular transition.

cAMP degradation mediated by:

Temporal shaping of extracellular cAMP waves depends on regulated degradation preventing uniform saturation. Secreted phosphodiesterase PdsA hydrolyzes cAMP to AMP in extracellular medium, creating troughs between pulses that allow receptor resensitization and directional sensing. PdsA is expressed during aggregation from cAMP-inducible promoter, membrane-associated, and inhibited by specific inhibitor PdiA. RegA degrades intracellular cAMP, ACA synthesizes cAMP, PiaA couples TOR complex 2 to ACA activation. Without PdsA, cAMP accumulates uniformly, abolishing gradient, cells fail to aggregate. Thus PdsA functions as essential extracellular terminator sculpting pulsatile dynamics that organize thousands of cells into streams.

Ref: Journal of Cell Biology, PdsA extracellular phosphodiesterase - cAMP wave shaping and aggregation chemotaxis.

Gene regulating terminal differentiation:

AcrA gene product ACB is intracellular adenylyl cyclase abundant during late slug and culmination stages, generating cAMP pool that elevates PKA activity driving terminal differentiation of prespore into mature spores and prestalk into stalk cells. Mutants lacking ACB exhibit defective sporulation, fragile stalks, and inability to maintain PKA-dependent gene expression after migration. ACA dominates earlier aggregation signaling, ACG senses osmolarity for germination, smlA regulates counting factor abundance, making them unsuitable for terminal differentiation control. ACB therefore integrates developmental cues ensuring irreversible commitment after motile phase, coupling metabolic state to morphogenetic completion and spore encapsulation processes.

Ref: Developmental Biology, ACB adenylyl cyclase AcrA in terminal differentiation - PKA control of spore maturation.

Stage following migration:

After phototactic migration, slug selects drier spot where ammonia dissipates, enabling culmination phase where anterior prestalk cells undergo programmed vacuolization, synthesize cellulose walls, and crawl down through prespore mass in reverse fountain movement forming stalk tube. Prespore cells ascend and encapsulate into spores atop stalk. This dramatic morphogenetic transition occurs without cell division, relying solely on sorting and terminal differentiation. Vegetative growth precedes aggregation, aggregation precedes migration; spore dispersal occurs only after culmination completes. Culmination therefore represents final architectural construction stage converting migratory slug into stationary fruiting body optimized for propagation.

Ref: Gilbert, Developmental Biology, 12th ed., Chapter 22: Culmination - reverse fountain movement and stalk tube formation.

Ammonia favors differentiation into:

Ammonia, catabolic byproduct accumulating within slug interior, influences cell fate and timing of culmination. Elevated ammonia increases intracellular cAMP via inhibition of RegA phosphodiesterase, activates PKA, and promotes prespore gene expression while suppressing prestalk vacuolization. Tip region, where ammonia volatilizes, maintains lower concentration permitting prestalk differentiation. In vitro monolayer assays demonstrate ammonium chloride addition favors prespore markers and inhibits ecmB induction. Low ammonia would favor prestalk. Ammonia does not directly drive migration or division but acts as diffusible inhibitor linking nitrogen metabolism to developmental decision, ensuring prespore bias in regions of high metabolic activity.

Ref: Cell Reports, Ammonia regulation of Dictyostelium cell fate - prespore promotion and prestalk repression.

Trishanku (triA) mutation results in:

Trishanku or triA gene named after mythologically suspended king encodes protein involved in cell adhesion and tip formation. Mutants complete early aggregation forming mounds but arrest at mound-to-finger transition, unable to initiate culmination. Tip organizer fails to produce cellulose sheath and lacks proper extracellular matrix deposition, so slugs do not erect. Hence phenotype is described as no culmination rather than no slug or multiple stalks. Early culmination would require premature activation, opposite to observed arrest. Molecular analyses suggest TriA influences cytoskeletal organization and tip-specific gene expression required for vertical growth and prestalk-to-stalk conversion during fruiting body morphogenesis.

Ref: Development, TriA/trishanku mutant - adhesion defects and failure to initiate culmination without tip organization.

Mutation in ACA gene results in:

ACA establishes positive feedback loop of cAMP signaling that organizes collective movement. Mutants lacking functional ACA fail to synthesize pulses, therefore no extracellular cAMP wave propagates, cells do not polarize, stream, or form mounds, and developmental program arrests early. Intracellular cAMP remains low, preventing induction of early genes like discoidin and contact site A. Phenotype includes lack of aggregation territory, no slug formation despite starvation. Normal aggregation patterns require ACA-mediated relay; excessive aggregation would require increased cyclase activity, while normal culmination occurs only if aggregation succeeded, demonstrating ACA indispensability at initiation of multicellular development.

Ref: Science, ACA null phenotype - failure to aggregate, cAMP pulse rescue and developmental arrest.

High osmolarity inhibits spore germination via:

High osmolarity within sorus fluid maintains spore dormancy preventing precocious germination while spores remain in fruiting body. Sensor adenylyl cyclase G, ACG, contains extracellular CHASE domain coupled to cyclase domain, activated by elevated osmolytes raising intracellular cAMP and sustaining PKA-mediated inhibition of germination genes. Upon dispersal into hypotonic environment such as soil water film, ACG activity drops, cAMP falls, and discoidin and germination proteins become expressed. ACA mediates aggregation; ACB mediates culmination; RegA is intracellular phosphodiesterase antagonizing germination pathway downstream of ACG rather than osmosensor itself, making ACG central to environmental sensing.

Ref: Current Biology, ACG osmosensor adenylyl cyclase - high osmolarity inhibition of spore germination via PKA.

Adenylyl cyclase in aggregation:

Among three adenylyl cyclases, ACA encoded by acaA is uniquely required for aggregation signaling. Transcribed from multiple developmental promoters, ACA produces both extracellular cAMP for chemotactic relay and intracellular cAMP for PKA-dependent gene expression. Null acaA cells cannot generate cAMP oscillations, remain unable to aggregate, and fail to express early genes despite starvation. Exogenous pulses can rescue development. ACB encoded by acrA acts later during culmination, while ACG encoded by acgA functions as osmosensor controlling spore dormancy. ACP is not a Dictyostelium cyclase isoform, making ACA definitive aggregation-specific enzyme.

Ref: PLOS ONE, ACA adenylyl cyclase as aggregation cyclase - acaA alternative promoters and signal relay function.

Chemical attracting aggregation secreted every:

Effective long-range aggregation requires non-continuous pulsatile emission of cAMP rather than steady gradient. Pacemaker cells spontaneously release cAMP every five to ten minutes, generating concentric waves degraded between pulses by extracellular phosphodiesterase PdsA. Intervals shorter than one to two minutes prevent receptor resensitization, while intervals longer than fifteen minutes degrade signal relay. Oscillatory frequency emerges from adaptation loop involving cAR1 phosphorylation, G protein activation, ACA refractory period, and PdsA recovery. Chemotacting amoebae move only during rising phase, pausing during falling phase, producing characteristic streaming pattern that efficiently gathers tens of thousands of cells toward center.

Ref: Cell, Dictyostelium cAMP waves - PdsA degradation and 5-10 minute oscillation dynamics in aggregation.